04.22.2005 07:20

NC State researchers decode rice blast fungus genome: rice's gravest fungal menace


Listening to the BBC this morning on WUNC, I heard an interview of Dr Ralph Dean, professor of plant pathology and director of North Carolina State University's Center for Integrated Fungal Research. He's the lead author of "The Genome Sequence of the Rice Blast Fungus Magnaporthe grisea", published in Nature yesterday, April 21, which announces the DNA genome mapping of the rice blast fungus.

Rice blast disease is caused by the fungus Magnaporthe grisea, and it's the plant's most destructive enemy. Sequencing is determining the nucleotides of a DNA or RNA strand (source: Sequencing). The genome of an organism is a complete DNA sequence of one set of chromosomes (source: Genome).
It is estimated that rice blast, the leading cause of rice loss, is responsible each year for killing enough rice to feed 60 million people worldwide.
Researchers Uncover Genome Sequence of Major Rice Pathogen, the press release from North Carolina State University announcing the genome sequencing of M. grisea and the Nature article.
The fungus gets its name from the way it blasts its way into the leaves of rice plants by growing a small 'bubble' that sticks to the plant. Pressure inside the bubble builds up until it bursts, allowing the fungus to push through the leaf's protective surface and into the plant.

The fungus can then invade the plant tissue, reproduce and infect other plants. When the fungus infects young rice seedlings it often kills the whole plant. Older plants infected yield little grain.
(Source, the excellent SciDev.net article Genetic secrets of rice's worst fungal pest unveiled, which provides information on Dr Dean's team's work on the fungus enzymes that break down the waxy coating that protects rice leaves, the unusually high number of rice blast fungus genes that help it to respond to changes in the environment: some of these genes are 'switched on' when the fungus attacks plant leaves, allowing the rice blast fungus to respond to its environment better than other fungi, and that viruses that effectively live inside rice blast fungus make it more difficult for the plants to recognise the fungus, meaning that both fungus and virus have a better chance of reproducing.)

Scientists sequenced rice's genome in 2002, so 'we now have crucial data for both the host (rice) and the pathogen (rice blast fungus). This will lead to a new way of tackling the fungus,' according to team member Lee Yong-hwan, of Seoul National University (source: Genome on Rice Killer Unveiled at The Korea Times)

M. grisea is highly adaptable, making it difficult to use fungicides and chemicals to control the disease.
Our team created about 20,000 genetically-engineered mutants of the rice blast fungus to get an insight into which gene should be killed to prevent its infection of rice.
said Prof Lee.

Both Dr Dean on the BBC and Prof Lee in The Korea Times said that perhaps in five years, 'a genetic solution of keeping the rice blast fungus at bay' could be developed.